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Exome Sequencing for Atypical Femoral Fractures

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ClinicalTrials.gov Identifier: NCT02731040
Recruitment Status : Completed
First Posted : April 7, 2016
Last Update Posted : December 31, 2018
Sponsor:
Information provided by (Responsible Party):
Steven Mumm, PhD, Washington University School of Medicine

Brief Summary:
The purpose of this study is to determine whether women who have atypical subtrochanteric and diaphyseal femoral fractures after treatment with bisphosphonates for osteoporosis, have a genetic predisposition to these unusual fractures.

Condition or disease Intervention/treatment
Atypical Femoral Fractures Osteoporosis Bisphosphonate Therapy Drug: Bisphosphonate

Detailed Description:

In 2010, a Task Force convened by the American Society for Bone and Mineral Research (ASBMR) investigated an apparent association of atypical subtrochanteric and diaphyseal femoral fractures (AFFs) with long-term bisphosphonate (BP) treatment given for the important and common disorder osteoporosis (OP).(1,2) Because the investigators had reported(2) in 2009 that the prodromal lesion for AFFs in OP resembles the femoral pseudofractures encountered in the rare adult form of hypophosphatasia (HPP),(3-5) they recommended sequencing the tissue non-specific alkaline phosphatase (TNSALP) gene of OP AFF patients to determine if mutations or polymorphisms in TNSALP genetically predispose to OP AFFs.(2)

In 2012, the investigators reported a 55-year-old woman treated for four years with BPs for presumed OP who then suffered simultaneous atraumatic bilateral AFFs.(4) Upon sequencing her TNSALP, a heterozygous mutation changing an arginine (Arg) to a histidine (His) (c.212 G>A, p.Arg71His) was discovered that the investigators had documented in the investigators' large cohort of HPP patients. She had been undiagnosed with HPP although her pre-BP serum ALP was persistently low (26 U/L, Nl 32 - 116 U/L). The investigators then recruited and sequenced TNSALP for 24 new OP AFF patients given BPs, and identified a second OP AFF patient carrying a TNSALP defect.(3) These two OP AFF patients with TNSALP defects support the investigators' hypothesis (below) that high-impact rare genetic variants in TNSALP, and perhaps other genes, can predispose to OP AFFs.(4) Furthermore, the investigators reported in 2009(2) that the prodromal lesions of OP AFFs can resemble the femoral pseudofractures seen in another, but more prevalent, heritable metabolic bone disease, X-linked hypophosphatemia (XLH). This is the most common genetic cause of osteomalacia,(6) and is inherited as an X-linked dominant trait caused by deactivating mutations in the PHEX gene.

Osteoporosis (OP) is a complex disorder likely involving the effects of multiple low-impact, common changes in the human genome that alter bone remodeling and/or mineralization.(7-9) The investigators propose that high-impact, rare, genetic variants predispose some OP patients to AFFs. Treatment with BPs could engender OP AFFs. The investigators' hypothesis: High-impact rare variants (i.e., mutations) that occur in genes/proteins that regulate pyrophosphate/phosphate homeostasis or BP metabolism predispose to OP AFFs and are unmasked in OP patients given BPs. Identification of these variants will guide OP therapies, perhaps on an individual basis (i.e., "personalized medicine"),(9) and reduce the incidence of OP AFFs.

The investigators will identify high-impact rare genetic variants using whole exome sequencing in two patient groups: 1) women using BPs for OP and have had one or more AFF, 2) women using BPs for OP but have not had an AFF. The investigators will focus on genes/proteins that: i) regulate pyrophosphate/phosphate effects, ii) others that regulate BP metabolism, and iii) have been associated with OP. The investigators will use gene burden analysis to determine whether there is an excess of novel or rare genetic variants for the group with AFFs.

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Study Type : Observational
Actual Enrollment : 38 participants
Observational Model: Case-Control
Time Perspective: Other
Official Title: Whole Exome Sequencing to Identify Genetic Predisposition to Atypical Femoral Fractures in Women Using Bisphosphonates for Osteoporosis
Study Start Date : April 2016
Actual Primary Completion Date : March 29, 2018
Actual Study Completion Date : March 29, 2018

Resource links provided by the National Library of Medicine


Group/Cohort Intervention/treatment
Controls
Women who are/have been on bisphosphonate therapy for osteoporosis who have not suffered an atypical femoral fracture
Drug: Bisphosphonate
Other Names:
  • Aledronate (Fosamax)
  • Zoledronate (Zometa and Reclast)
  • Risendronate (Actonel and Atelvia)
  • Etidronate (Didronel)
  • Ibandronate (Boniva)

Fracture Group
Women who are/have been on bisphosphonate therapy for osteoporosis who have suffered an atypical femoral fracture
Drug: Bisphosphonate
Other Names:
  • Aledronate (Fosamax)
  • Zoledronate (Zometa and Reclast)
  • Risendronate (Actonel and Atelvia)
  • Etidronate (Didronel)
  • Ibandronate (Boniva)




Primary Outcome Measures :
  1. Whole Exome Sequencing to identify mutations in genes that regulate pyrophosphate metabolism. [ Time Frame: Within the first year of study ]
    Whole Exome Sequencing will be used to identify changes in DNA sequences of genes which regulate pyrophosphate metabolism. These changes could alter the amino acid sequence, and may include termination of translation, or affect mRNA splicing.

  2. Whole Exome Sequencing to identify mutations in genes that regulate phosphate metabolism. [ Time Frame: Within the first year of study ]
    Whole Exome Sequencing will be used to identify changes in DNA sequences of genes which regulate phosphate metabolism. These changes could alter the amino acid sequence, and may include termination of translation, or affect mRNA splicing.

  3. Whole Exome Sequencing to identify mutations in genes that regulate bisphosphonate metabolism. [ Time Frame: Within the first year of study ]
    Whole Exome Sequencing will be used to identify changes in DNA sequences of genes which regulate bisphosphonate metabolism. These changes could alter the amino acid sequence, and may include termination of translation, or affect mRNA splicing.



Information from the National Library of Medicine

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Ages Eligible for Study:   Child, Adult, Older Adult
Sexes Eligible for Study:   Female
Accepts Healthy Volunteers:   No
Sampling Method:   Non-Probability Sample
Study Population
Women who are or have been taking bisphosphonates for osteoporosis.
Criteria

Inclusion Criteria:

  • Female
  • Previous and/or current use of bisphosphonate therapy for the management of osteoporosis

For inclusion in the fracture group must have:

-sustained one or more atypical subtrochanteric or diaphyseal femoral shaft fracture(s) as defined by the the 2010 ASBMR task force.

Exclusion Criteria:

  • None

Information from the National Library of Medicine

To learn more about this study, you or your doctor may contact the study research staff using the contact information provided by the sponsor.

Please refer to this study by its ClinicalTrials.gov identifier (NCT number): NCT02731040


Sponsors and Collaborators
Washington University School of Medicine
Investigators
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Principal Investigator: Steven Mumm, PhD Washington University School of Medicine
Publications:
Whyte MP. Hypophosphatasia. In Pediatric Bone: Biology & Diseases, 3rd ed. Glorieux FH, Jueppner H, Pettifor J, eds. San Diego, CA: Elsevier, 2012;771-794.
Duncan, E.L., Brown, M.A. Genome-wide association studies (2013) Genetics of Bone Biology and Skeletal Disease, pp. 93-100
Nguyen, T.V., Eisman, J.A. Pharmacogenetics and pharmacogenomics of osteoporosis: personalized medicine outlook (2013) Genetics of Bone Biology and Skeletal Disease, pp. 151-167
Rivadeneira, F., Uitterlinden, A.G. Osteoporosis Genes Identified by Genome-wide Association Studies (2013) Genetics of Bone Biology and Skeletal Disease, pp. 243-256.

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Responsible Party: Steven Mumm, PhD, Associate Professor of Medicine, Washington University School of Medicine
ClinicalTrials.gov Identifier: NCT02731040    
Other Study ID Numbers: 53302
First Posted: April 7, 2016    Key Record Dates
Last Update Posted: December 31, 2018
Last Verified: December 2018
Additional relevant MeSH terms:
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Osteoporosis
Fractures, Bone
Femoral Fractures
Wounds and Injuries
Bone Diseases, Metabolic
Bone Diseases
Musculoskeletal Diseases
Metabolic Diseases
Leg Injuries
Ibandronic Acid
Zoledronic Acid
Diphosphonates
Bone Density Conservation Agents
Physiological Effects of Drugs