Molecular Basis of Food Allergy
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ClinicalTrials.gov Identifier: NCT01832324 |
Recruitment Status :
Recruiting
First Posted : April 16, 2013
Last Update Posted : December 23, 2022
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The Study examines the molecular basis of food allergy. It explores the interaction between T cells, InKT cells and cytokines in the development of food allergy. The study also explores these factors in development of tolerance "outgrowing" food allergy. It will also explore the genetic factors that lead to the development of food allergy.
The study examines all type of food allergy including IgE mediated reactions, Eosinophilic Esophagitis and Food Protein Induced Enterocolitis
Condition or disease |
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Food Allergy Eosinophilic Esophagitis |
Study Type : | Observational |
Estimated Enrollment : | 5300 participants |
Observational Model: | Case-Control |
Time Perspective: | Prospective |
Official Title: | Molecular Basis of Food Allergy and Food Tolerance |
Study Start Date : | January 2011 |
Estimated Primary Completion Date : | December 2027 |
Estimated Study Completion Date : | December 2030 |

- Blood sample for mechanistic studies: [ Time Frame: 1 year ]Blood will be obtained by venipuncture. The blood samples will be used to estimate the frequency of to estimate the frequency and the products of cells involved in the allergic reaction. We will quantify the number of lymphocytes and their subsets, and the number granulocytes (neutrophils, basophils, and eosinophils) and monocytes and we will analyze their products (such as cytokines, chemokines, prostanoids). Such analysis will be performed doing cytoflow studies, using 4 color flow cytometry (BD FACSCalibur Flow XCytometry System) at the Children's Hospital Flow Cytometry core facilities, ELISA, mRNA analysis and western blots using when indicated the Nucleic Acid/Protein Core. If blood won't be all used up in the aforementioned tests it will be stored in nitrogen liquid for future similar tests or repetition of the ones already performed in case of technical problem with the first attempt.
- Blood sample for genetic study (optional) [ Time Frame: 1 year ]
The Center for Applied Genomics (CAG) will perform genetic analysis. All subjects (cases and controls) have been or will be genotyped on the Illumina HumanHap BeadArray SNP platform, and data has been stored in following an IRB approved protocol
Whole Exon Sequencing (also known as targeted exome capture) is an efficient strategy to selectively sequence the coding regions of the genome as a cheaper but still effective alternative to whole genome sequencing. Exons are short, functionally important sequences of DNA which represent the regions in genes that are translated into protein and the untranslated region flanking them (UTR). It is estimated that the protein coding regions of the human genome constitute about 85% of the disease-causing mutations.
Statistical analysis will be done in conjunction with CAG and Children's Hospital of Philadelphia (CHOP) bioinformatics center. We will compare the genetic variants identified between sequencing and SNPs -based genotyping.
- EndoPat Test (optional) [ Time Frame: 1 year ]EndoPat is a noninvasive endothelial function assessment. Patient should rest comfortably for 10 minutes prior to the test. Using a standard blood pressure cuff, the brachial artery is occluded for a 5 minute period. When the cuff is released, EndoPat measures blood flow rates pre-occlusion and post-occlusion. This test requires patients to sit still for 15 minutes. It's recommended that the patient fast 3 to 8 hours before the test. In addition, the following drugs should not be used for 24 hours before testing: Nitroglycerine, Alpha-blockers, beta-blockers, and calcium channel blockers, ACE inhibitors, Statins
Biospecimen Retention: Samples With DNA

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Ages Eligible for Study: | 1 Month to 65 Years (Child, Adult, Older Adult) |
Sexes Eligible for Study: | All |
Accepts Healthy Volunteers: | Yes |
Sampling Method: | Probability Sample |
Inclusion Criteria for Study Group:
- Males or females age 1 month to 65 years.
- Diagnosis of Food Allergy. Food Allergy can be either IgE or non-IgE mediated food allergy including Eosinophilic Esophagitis and Food Protein Induced Enterocolitis.
Inclusion Criteria for Control group:
- Age and sex matched patients without food allergies
- Sibling and parents of patients with food allergies
Inclusion Criteria for Control group with atopy:
- Age and sex matched patients without food allergies
- Sibling and parents of patients with food allergies
- Patients with atopy
Exclusion Criteria
- Underlying disease or medical problem that is judged to serious or risky to allow 3 ml/kg of blood to be drawn from a vein (such as serious anemia, cancer, poor vein abscess, serious infections).
- Subjects that do not meet the enrollment criteria may not be enrolled. Any violations of these criteria will be reported in accordance with Institutional Review Board (IRB) policies and procedures study procedures.

To learn more about this study, you or your doctor may contact the study research staff using the contact information provided by the sponsor.
Please refer to this study by its ClinicalTrials.gov identifier (NCT number): NCT01832324
Contact: Sharon Carbonara | 267-426-8603 | carbonara@chop.edu |
United States, Pennsylvania | |
The Children's Hospital of Philadelphia | Recruiting |
Philadelphia, Pennsylvania, United States, 19104 | |
Contact: Sharon Carbonara 267-426-8603 carbonara@chop.edu | |
Principal Investigator: Jonathan M Spergel, MD, PhD |
Principal Investigator: | Jonathan M Spergel, MD, PhD | Children's Hospital of Philadelphia |
Responsible Party: | Children's Hospital of Philadelphia |
ClinicalTrials.gov Identifier: | NCT01832324 |
Other Study ID Numbers: |
08-005998 R01AI097333-01A1 ( U.S. NIH Grant/Contract ) |
First Posted: | April 16, 2013 Key Record Dates |
Last Update Posted: | December 23, 2022 |
Last Verified: | December 2022 |
Individual Participant Data (IPD) Sharing Statement: | |
Plan to Share IPD: | No |
Food Allergy Eosinophilic Esophagitis Food Protein Induced Enterocolitis iNKT Cells T cells |
Esophagitis Eosinophilic Esophagitis Hypersensitivity Food Hypersensitivity Immune System Diseases Esophageal Diseases Gastrointestinal Diseases |
Digestive System Diseases Gastroenteritis Hypersensitivity, Immediate Eosinophilia Leukocyte Disorders Hematologic Diseases |