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Microarray Analysis for Human Genetic Disease

This study has been completed.

Sponsored by: National Human Genome Research Institute (NHGRI)
Information provided by: National Institutes of Health Clinical Center (CC)
ClinicalTrials.gov Identifier: NCT00001898
  Purpose

This study will look at genetic changes which occur in the development of male and female breast cancer and other cancer. It will use a new technology called DNA microarray hybridization that looks at a wide array of genes to identify disease-associated patterns in the human genome (complete set of human genes). Numerous studies have linked particular genes to a given disease, but there is very little information on patterns of gene expression (production of proteins from genetic coding) in the entire human genome.

Pinpointing genetic abnormalities in disease may help classify different forms of cancer and perhaps lead to new avenues of treatment or prevention. A primary goal of this study will be to create a database of gene expression for human cancers and other disorders that will provide the basis for finding genetic abnormalities in disease.

Tumors specimens used in this study will be taken from tissues biopsied from patients with breast, colon cancer, sarcomas or melanoma as part of their routine care. Patients in the study will be among those receiving care at the: Department of Oncology, University Hospital, University of Lund, Sweden (breast cancer); Department of Medicine, University of Michigan, Ann Arbor, Michigan (breast cancer); Surgery Branch, National Cancer Institute, Bethesda, Maryland (melanoma), Johns Hopkins Univ. (colon cancer), Memorial Sloan Kettering (sarcoma).

Patients in the study will have a family history taken and will complete a questionnaire. Some patients will be asked to have a blood test. Breast cancer patients will have a mammogram if one has not been done within the last year.


Condition
Breast Neoplasm
Hereditary Neoplastic Syndrome
Melanoma
Ovarian Neoplasm

Genetics Home Reference related topics:   breast cancer   

MedlinePlus related topics:   Breast Cancer    Cancer    Melanoma    Ovarian Cancer   

U.S. FDA Resources

Study Type:   Observational
Official Title:   Microarray Analysis for Human Genetic Disease

Further study details as provided by National Institutes of Health Clinical Center (CC):

Estimated Enrollment:   1500
Study Start Date:   June 1999
Estimated Study Completion Date:   May 2008

Detailed Description:

The purpose of our study is to make use of a novel technology that the Cancer Genetics Branch of the NHGRI has been a leader in developing. This technology for genome-wide expression analysis, DNA microarray hybridization, is the focus of our protocol. We will access tissue banks collected by our collaborators that contain excess tissues obtained during routine clinical care. Specimens will be processed for large-scale gene expression analysis and DNA copy number determination using DNA microarrays. The development and analysis of this gene expression and gene copy number database are the primary purpose of this study. Currently available and new bioinformatics tools will be applied to the data for the characterization of disease subsets (e.g., early vs. advanced stage cancer) as well as to mine the data for specific genes which are linked to given disease states.

  Eligibility
Genders Eligible for Study:   Both
Accepts Healthy Volunteers:   No

Criteria
  • Clinical inclusion/exclusion criteria will be dependent upon the collaborating Institutions' requirements.
  Contacts and Locations

Please refer to this study by its ClinicalTrials.gov identifier: NCT00001898

Locations
United States, Arizona
Arizona Cancer Center    
      Tucson, Arizona, United States, 85724
United States, Maryland
Johns Hopkins University    
      Baltimore, Maryland, United States, 21205
United States, Michigan
University of Michigan    
      Ann Arbor, Michigan, United States, 48109-0624
United States, New York
Memorial Sloan Kettering Cancer Center    
      New York, New York, United States, 10021
United States, Texas
MD Anderson Cancer Center    
      Houston, Texas, United States, 77030-4096
Finland
Helsinki University Central Hospital    
      Helsinki, Finland
Iceland
University of Iceland    
      Reykjavik, Iceland
Sweden
University of Lund    
      Lund, Sweden

Sponsors and Collaborators
  More Information


Publications:

Study ID Numbers:   990130, 99-HG-0130
First Received:   November 3, 1999
Last Updated:   May 21, 2008
ClinicalTrials.gov Identifier:   NCT00001898
Health Authority:   United States: Federal Government

Keywords provided by National Institutes of Health Clinical Center (CC):
Melanoma  
Breast Cancer  
Gene Expression  
DNA Chip Technology  
Expressed Sequence Tags  

Study placed in the following topic categories:
Ovarian cancer
Ovarian Neoplasms
Skin Diseases
Gonadal Disorders
Genital Neoplasms, Female
Endocrine System Diseases
Breast Neoplasms
Urogenital Neoplasms
Ovarian Diseases
Melanoma
Neuroendocrine Tumors
Genital Diseases, Female
Neuroectodermal Tumors
Neoplastic Syndromes, Hereditary
Genetic Diseases, Inborn
Neoplasms, Germ Cell and Embryonal
Nevus, Pigmented
Neuroepithelioma
Endocrinopathy
Nevus
Breast Diseases
Endocrine Gland Neoplasms

Additional relevant MeSH terms:
Neoplasms
Pathologic Processes
Disease
Neoplasms by Histologic Type
Neoplasms by Site
Syndrome
Neoplasms, Nerve Tissue
Nevi and Melanomas
Adnexal Diseases

ClinicalTrials.gov processed this record on November 30, 2008




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